Diversity patterns of stygobiotic crustaceans across multiple spatial scales in Europe

1. Using species distribution data from 111 aquifers distributed in nine European regions, we examined the pairwise relationships between local species richness (LSR), dissimilarity in species composition among localities, and regional species richness (RSR). In addition, we quantified the relative contribution of three nested spatial units – aquifers, catchments and regions – to the overall richness of groundwater crustaceans.
2. The average number of species in karst and porous aquifers (LSR) varied significantly among regions and was dependent upon the richness of the regional species pool (RSR). LSR–RSR relationships differed between habitats: species richness in karstic local communities increased linearly with richness of the surrounding region, whereas that of porous local communities levelled off beyond a certain value of RSR.
3. Dissimilarity in species composition among aquifers of a region increased significantly with increasing regional richness because of stronger habitat specialisation and a decrease in the geographic range of species among karst aquifers. Species turnover among karst aquifers was positively related to RSR, whereas this relationship was not significant for porous aquifers.
4. The contribution of a given spatial unit to total richness increased as size of the spatial unit increased, although 72% of the overall richness was attributed to among-region diversity. Differences in community composition between similar habitats in different regions were typically more pronounced than between nearby communities from different habitats.
5. We conclude by calling for biodiversity assessment methods and conservation strategies that explicitly integrate the importance of turnover in community composition and habitat dissimilarity at multiple spatial scales.     

Spatial and temporal analysis of non-steady elongation of rice leaves

A precise knowledge of the temporal and spatial distributions of cell division and tissue expansion is essential for appropriate leaf sampling in omics studies and for analyses of plant–environment relations. Elongating leaves of rice were studied during their whole development for elongation rate, distribution of cell length, cell production rate and spatial distribution of growth in the leaf. In seven genotypes, the pattern of leaf elongation rate followed three phases: (1) an exponential increase before leaf appearance; (2) a short phase (2–4 d at 20 °C) with a stable leaf elongation rate around leaf appearance; and (3) a phase of 8–10 d with a progressive decrease in elongation rate. The profile of cell length along the leaf changed with time during the first and last phases, but was time invariant around appearance. We propose a method adapted to non-steady elongation based on anatomical measurements, which was successfully tested by comparing it with the pricking method. It allowed analysis of the change with time in the spatial distribution of growth from initiation to end of leaf growth. The length of leaf zones with cell division and tissue elongation varied with time, with maximums of 21 and 60 mm respectively around leaf appearance.     

The limits of cryptic diversity in groundwater: phylogeography of the cave shrimp Troglocaris anophthalmus (Crustacea: Decapoda: Atyidae)

Recent studies have revealed high local diversity and endemism in groundwaters, and showed that species with large ranges are extremely rare. One of such species is the cave shrimp Troglocaris anophthalmus from the Dinaric Karst on the western Balkan Peninsula, apparently uniform across a range of more than 500 kilometres. As such it contradicts the paradigm that subterranean organisms form localized, long-term stable populations that cannot disperse over long distances. We tested it for possible cryptic diversity and/or unexpected evolutionary processes, analysing mitochondrial (COI, 16S rRNA) and nuclear (ITS2) genes of 232 specimens from the entire range. The results of an array of phylogeographical procedures congruently suggested that the picture of a widespread, continuously distributed and homogenous T. anophthalmus was wrong. The taxon is composed of four or possibly five monophyletic, geographically defined phylogroups that meet several species delimitation criteria, two of them showing evidence of biological reproductive isolation in sympatry. COI genetic distances between phylogroups turned out to be a poor predictor, as they were much lower than the sometimes suggested crustacean threshold value of 0.16 substitutions per site. Most results confirmed the nondispersal hypothesis of subterranean fauna, but the southern Adriatic phylogroup displayed a paradoxical pattern of recent dispersal across 300 kilometres of hydrographically fragmented karst terrain. We suggest a model of migration under extreme water-level conditions, when flooded poljes could act as stepping-stones. In the north of the range (Slovenia), the results confirmed the existence of a zone of unique biogeographical conflict, where surface fauna is concordant with the current watershed, and subterranean fauna is not.     

Biodiversity and the mitigation of climate change through bioenergy: impacts of increased maize cultivation on farmland wildlife

The public promotion of renewable energies is expected to increase the number of biogas plants and stimulate energy crops cultivation (e.g. maize) in Germany. In order to assess the indirect effects of the resulting land‐use changes on biodiversity, we developed six land‐use scenarios and simulated the responses of six farmland wildlife species with the spatially explicit agent‐based model system ALMaSS. The scenarios differed in composition and spatial configuration of arable crops. We implemented scenarios where maize for energy production replaced 15% and 30% of the area covered by other cash crops. Biogas maize farms were either randomly distributed or located within small or large aggregation clusters. The animal species investigated were skylark (Alauda arvensis), grey partridge (Perdix perdix), European brown hare (Lepus europaeus), field vole (Microtus agrestis), a linyphiid spider (Erigone atra) and a carabid beetle (Bembidion lampros). The changes in crop composition had a negative effect on the population sizes of skylark, partridge and hare and a positive effect on the population sizes of spider and beetle and no effect on the population size of vole. An aggregated cultivation of maize amplified these effects for skylark. Species responses to changes in the crop composition were consistent across three differently structured landscapes. Our work suggests that with the compliance to some recommendations, negative effects of biogas‐related land‐use change on the populations of the six representative farmland species can largely be avoided.     

Linking ecological function to species composition in ecological restoration: Seed removal by ants in recreated woodland

Evaluations of ecological restoration typically focus on associating measures of structural properties of ecosystems (e.g. species diversity) with time since restoration efforts commenced. Such studies often conclude a failure to achieve restoration goals without examining functional performance of the organism assemblages in question. We compared diversity and composition of ant assemblages and the rates of seed removal by ants in pastures, 4‐ to 10‐year old revegetated areas and remnants of Cumberland Plain Woodland, and an endangered ecological community in Sydney, Australia. Ant assemblages of forest remnant sites had significantly higher species richness, significantly different species composition and a more complex functional group structure in comparison with ant assemblages of pasture and revegetated sites, which did not differ significantly. However, the rates of seed removal by ants in revegetated sites were similar to those in forest remnants, with the rates in pasture sites being significantly lower. Approximately, one‐third of all ant species were observed to remove seeds. Forest remnant sites had significantly different assemblages of seed removing ant species from those in pasture and revegetated sites. These results demonstrate that similar ant assemblages of unrestored and restored areas can function differently, depending on habitat context. Evaluation of restoration success by quantifying ecosystem structure and function offers more insights into ecosystem recovery than reliance on structural data alone.     

A biomechanical constraint on body mass in terrestrial mammalian predators

Observations on extant mammals suggest that large body mass is selectively advantageous for a terrestrial predator on large herbivores. Yet, throughout the Cenozoic, some lineages of terrestrial mammalian predators attained greater maximal body masses than others. In order to explain this evolutionary pattern, the following biomechanical constraint on body mass is hypothesized. The stress, set up in the humerus by the bending moment of the peak ground reaction force at maximal running speed, increased with increasing body mass within a given lineage of terrestrial mammalian predators, resulting in a decreasing safety factor for the bone, until a predator could no longer attain the maximal running speed of its smaller relatives. The selective disadvantage of reduced maximal running speed prevented further increase of body mass within the lineage. This hypothesis is tested by examining the scaling of humeral dimensions and estimating maximal body masses in several lineages of terrestrial mammalian predators. Among lineages with otherwise similar postcranial skeletons, those with the more robust humeri at a given body mass attained the greater maximal body masses. Lineages with the longer deltoid ridges/deltopectoral crests of the humeri and/or the more distally located deltoid scars (suggesting the more distal insertions of the humeral flexors) at a given body mass also attained the greater maximal body masses. These results support the existence of the proposed biomechanical constraint, although paleoecological data suggest that some lineages of terrestrial mammalian predators failed to reach the limits, imposed by this constraint, because of the small size of available prey.